PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011086053.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family Dof
Protein Properties Length: 278aa    MW: 30339.6 Da    PI: 9.852
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011086053.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof118.72.3e-373289461
          zf-Dof  4 kalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61
                      +kcprCds+ntkfCyynnyslsqPry+Ck+CrryWt+GG+lrnvPvGgg+rk k+s
  XP_011086053.1 32 PPRKCPRCDSSNTKFCYYNNYSLSQPRYYCKTCRRYWTHGGTLRNVPVGGGCRKIKRS 89
                    5689**************************************************9987 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF027012.5E-323488IPR003851Zinc finger, Dof-type
PROSITE profilePS5088428.7233488IPR003851Zinc finger, Dof-type
PROSITE patternPS0136103672IPR003851Zinc finger, Dof-type
ProDomPD0074782.0E-204087IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    Send to blast
MERERNEENN LRQQQDPGRQ MAANDHHQPP PPPRKCPRCD SSNTKFCYYN NYSLSQPRYY  60
CKTCRRYWTH GGTLRNVPVG GGCRKIKRSR TSSSSFSSSE IARTQCSSPA LPSQNLTGMI  120
SGQVVRPVPR VIPTAGNSFY TGRACLPSLG TMQSLPGEIN QRASVNLDGG NNQFGANMAL  180
LQGLSFQTLR PQTANQFQPQ AHYFPSQQSL VPPRPPLSSW TQSLINPGAS SSSSANSSIW  240
SSATGCNIAD GSNQAAGSSF STGQWADNHH PGFNPPHH
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011086053.10.0PREDICTED: dof zinc finger protein DOF2.2-like
TrEMBLA0A022QL731e-64A0A022QL73_ERYGU; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8824419
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60200.13e-26TARGET OF MONOPTEROS 6